Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015909994.1_cds_XP_016460082.1_53542
CDS Infomation

[gene=LOC107783613] [db_xref=GeneID:107783613] [protein=pentatricopeptide repeat-containing protein At1g77405-like] [protein_id=XP_016460082.1] [location=complement(143672..145015)] [gbkey=CDS]
Sequence

ATGTTGTCATCAAGATCACTTTCTTCTCCTAATTTTACCCAAAACCTTCTTATAAACCAA
GTTTTAGCTGCAATTATCCGAAATCGGCCGTTTGAGAAAAATGTCTCAGCCTCAATTCCC
AACCAACCCATTTGGACTGTAGAAGCAGTTTCTCAAGTCCTAAGATCAATCCCCATATAC
CTCTTCCAATCTCCAAGATCCATTGGCCGCCAAAGTGGGTTTCGCCACCGTACCCCATTA
AAGCAAAGAAACCTAAGAGAAGAATTCCATAAGGCCCGAAAACGGGTACTCATTCTTGGT
CCAGCTGCTCATAGAGATCCTCAAAATGTACAGATAGGCGTGGACAAAGCACTAGAATTT
TTCCATTGGGTTGAGACTCATTGTGCGTTTACTCACAATGAGCTCACGTGTAAGGAGATG
TCTCTTGTTCTTGCTAAAGGGGGTTGTAAATTGAAACTCATTTGGGAATTTCTCAAAAAG
ATGTCAAGAAAAGGGCTCGTTACGACACCGACCGTTACATGTTTGATAAAACGCCTAGGA
GAAGAAGGGTTAGTGGAAGAAGCATTGGCTACCTTTTATAGAATGAAACAGTTTCACTGT
AAGCCTGATGTGTATGCTTACAACACTCTAATATTAGCTCTTTGTAGAGTTGGAAATTTC
AAGAAAGCCAAGTTTTTGTTGGAGCAAATGGAGTTGCCGGGGTTTAGGTGTCCACCTGAT
GTGTTCACTTACACAATCTTGATTAGCTCTTATTGTAGGTATGGTCTGGAAACTGGCTGT
AGAAAAGCTATTAGGAGGAGAATATGGGAGGCGAATCACTTGTTTCGCCTTATGCTATTC
AAAGGATTTGTTCCTGACGTTGTAACTTATAATAGTTTGATCAATGGATGCTGCAAAACT
AATAGGATAGAGAGGGCAATGGAGTTGTTGGATGATATGGTGAAAAGGGGTATTGCACCT
AATCGAATTACGCATAATTCTTTCATAAGGTACTACAGTGCTACTAATGAGATTGATAAG
GCTATTGAGATGCTGAGAAGAATGCAAGGAATGGATGATGGAGTGGTAGCATGTAACAGT
TCATATACACCGATAATTCATGCCCTGTGTGAAGCTGGTAGGGTGGTGGAGGCGAAAGAT
TTTCTTGTGGAATTGGCTGAACATGGTTCAATTCCAAGAGAATATACTTATAAACTAGTT
CGTGATGCTTTAGAATCTGCAGGGAAGATTGATTTACTTGATGCAGAATTTTGTAGGCGA
TTAGAAGATGGTATTAAAGGTAGGATTAGACAAGTGATGAAAATGAAACCTTTGTTGCAG
CATGAAAGTATTTCTTGGCATTGA

Peptide Sequence

PEP ID

XP_016460082.1
PEP Infomation

PREDICTED: pentatricopeptide repeat-containing protein At1g77405-like [Nicotiana tabacum]
Sequence

MLSSRSLSSPNFTQNLLINQVLAAIIRNRPFEKNVSASIPNQPIWTVEAVSQVLRSIPIY
LFQSPRSIGRQSGFRHRTPLKQRNLREEFHKARKRVLILGPAAHRDPQNVQIGVDKALEF
FHWVETHCAFTHNELTCKEMSLVLAKGGCKLKLIWEFLKKMSRKGLVTTPTVTCLIKRLG
EEGLVEEALATFYRMKQFHCKPDVYAYNTLILALCRVGNFKKAKFLLEQMELPGFRCPPD
VFTYTILISSYCRYGLETGCRKAIRRRIWEANHLFRLMLFKGFVPDVVTYNSLINGCCKT
NRIERAMELLDDMVKRGIAPNRITHNSFIRYYSATNEIDKAIEMLRRMQGMDDGVVACNS
SYTPIIHALCEAGRVVEAKDFLVELAEHGSIPREYTYKLVRDALESAGKIDLLDAEFCRR
LEDGIKGRIRQVMKMKPLLQHESISWH

Transcript Sequence

Gene sequence data has not been registered.